Development

This page contains standard practices for developing Amp, focusing on repositories and documentation.

Repositories and branching

The main Amp repository lives on bitbucket, andrewpeterson/amp . We employ a branching model where the master branch is the main development branch, containing day-to-day commits from the core developers and honoring merge requests from others. From time to time, we create a new branch that corresponds to a release. This release branch contains only the tagged release and any bug fixes.

Contributing

You are welcome to contribute new features, bug fixes, better documentation, etc. to Amp. If you would like to contribute, please create a private fork and a branch for your new commits. When it is ready, send us a merge request. We follow the same basic model as ASE; please see the ASE documentation for complete instructions.

As good coding practice, make sure your code passes both the pyflakes and pep8 tests. (On linux, you should be able to run pyflakes file.py and pep8 file.py, and then correct it by autopep8 –in-place file.py.) If adding a new feature: consider adding a (very brief) test to the tests folder to ensure your new code continues to work, and also be sure to write clear documentation.

It is also a good idea to send us an email if you are planning something complicated.

Documentation

This documentation is built with sphinx. (Mkdocs doesn’t seem to support autodocumentation.) To build a local copy, cd into the docs directory and try a command such as

sphinx-build . /tmp/ampdocs
firefox /tmp/ampdocs/index.html &  # View the local copy.

This uses the style “bizstyle”; if you find this is missing on your system, you can likely install it with

pip install --user sphinxjp.themes.bizstyle

You should then be able to update the documentation rst files and see changes on your own machine. For line breaks, please use the style of containing each sentence on a new line.

Releases

To create a release, we go through the following steps.

  • Create a new branch on the bitbucket repository with the version name, as in v0.5. (Don’t create a separate branch if this is a bugfix release, e.g., 0.5.1 — just add those to the v0.5 branch.) All subsequent work is in the new branch. Note the branch name starts with “v”, while the tag names will not, to avoid naming conflicts.
  • Change docs/conf.py‘s version information to match the new version number.
  • Change the version that prints out in the Amp headers by changing the _ampversion variable in amp/__init__.py.
  • Change revision history to include this release; generally the changes should have been catalogued under a “Development version” heading.
  • Commit and push the changes to the new branch on bitbucket.
  • Tag the release with the release number, e.g., ‘0.5’ or ‘0.5.1’, the latter being for bug fixes. Do this on a local machine (on the correct branch) with git tag -a 0.5, followed by git push origin –tags.
  • Add the version to readthedocs’ available versions; also set it as the default stable version.
  • Change the nightly tests to test this branch as the “stable” build.
  • Create a DOI for the release via zenodo.org. Note that all the ”.git” files and folders should be removed from the files before uploading to Zenodo. The DOI can then be added to the development version’s release notes. (I don’t think there’s a way to get it into the archival version on Zenodo!)